Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904261.1_cds_XP_016454403.1_48431
CDS Infomation

[gene=LOC107778629] [db_xref=GeneID:107778629] [protein=malate dehydrogenase [NADP], chloroplastic-like isoform X2] [protein_id=XP_016454403.1] [location=join(15399..15565,15966..16059,16757..16841,17186..17367,17471..17541,17632..17722,18461..18535,18607..18708,18790..18912,19374..19442,19537..19605,19789..19842,19958..20011)] [gbkey=CDS]
Sequence

ATGGCAGTAGCAGAGTTTATTCCTTCTTCTTCATTTACAAATAAGACCAATGTTTACTCA
TCACAGTTTTCTTATGTATCAACTCAGATTTCCCAGAAGCGCCGCTTCAGTCTTAGACCT
CTACCAAGAAGCCATTATTCTCAAATTTGTTGCTCCGTAACGTCGAAAGAAGTTCAAGCG
CCAACAGTAGTACAAACTGATGATCCAAAGAAGAAACCAGAGTGCTATGGAGTTTTTTGT
CTCACTTATGATCTCAAGGCTCTTGCATCTGGTGAGGTTTTTGGACCAGATCAGCCTATT
GCATTAAGGTTATTGGGGTCCGAGCGCTCCATCCAAGCGCTCGAAGGAGTTGCTATGGAA
CTAGAAGACTCTTTGTATCCTTTGCTTAGGGAAGTGAATATCGGTACAGATCCCTACGAG
GTTTTCCAGGATGCAGAATGGGCACTTCTTATCGGAGCAAAGCCTCGAGGTCCTGGTATG
GAACGAGCTGGTTTATTGGATATAAATGGTCAAATCTTCGCGGAGCAGGGGAAAGCTCTC
AATGATGTTGCATCGCGTAATGTCAAGGTGATAGTAGTTGGGAACCCTTGTAATACCAAT
GCATTGATTTGTTTGAAAAATGCTCCAAACATACCTGCAAAGAACTTCCATGCTTTGACT
AGGTTAGATGAAAATAGAGCCAAATGCCAGCTGGCTCTAAAAGCTGGAGTCTTCTATGAT
AAAGTATCTAATGTTACCATATGGGGCAACCACTCAACTACTCAGGTTCCAGATTTTTTA
AATGCTAAAATTAATGGATTGCCAGTTAAAGAGGTGATTAAAGACACTAAATGGTTAGAG
GAAGAGTTCACTGAAAAAGTCCAAAAGAGAGGTGGTGTACTTATTCAGAAATGGGGAAGA
TCTTCAGCTGCATCAACTGCTGTGTCAATTGTTGATGCAATAAGGTCGCTCGTCACTCCT
ACGCCTGAAGGCGATTGGTTTTCTACCGGAGTGTATACCAGTGGAAATCCTTATGGGATA
GCAGAGGATATAGTTTTCAGCATGCCTTGTAGATCAAAAGGAGATGGTGACTATGAACTA
GTAAAGGAAGTAATTTTTGACGACTACCTTTGGAGCCGAATAAAGAAGTCAGAAGATGAG
TTGCTCGCGGAGAAAAGATGTGTAGCTCACCTTACAGGAGAGGGTATCGCTGTCTGTGAT
CTGCCAGGGGATACAATGCTTCCAGGAGAAATGTGA

Peptide Sequence

PEP ID

XP_016454403.1
PEP Infomation

PREDICTED: malate dehydrogenase [NADP], chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MAVAEFIPSSSFTNKTNVYSSQFSYVSTQISQKRRFSLRPLPRSHYSQICCSVTSKEVQA
PTVVQTDDPKKKPECYGVFCLTYDLKALASGEVFGPDQPIALRLLGSERSIQALEGVAME
LEDSLYPLLREVNIGTDPYEVFQDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKAL
NDVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYD
KVSNVTIWGNHSTTQVPDFLNAKINGLPVKEVIKDTKWLEEEFTEKVQKRGGVLIQKWGR
SSAASTAVSIVDAIRSLVTPTPEGDWFSTGVYTSGNPYGIAEDIVFSMPCRSKGDGDYEL
VKEVIFDDYLWSRIKKSEDELLAEKRCVAHLTGEGIAVCDLPGDTMLPGEM

Transcript Sequence

Gene sequence data has not been registered.